STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YbhR_1ABC transporter permease. (379 aa)    
Predicted Functional Partners:
YbhF_1
ABC transporter ATP-binding protein.
  
 0.993
YbhF_2
ABC transporter ElsE.
    0.965
YbhF_3
ABC transporter ATP-binding protein.
  
 0.963
Lwal_0008
Hemolysin D.
 
  
 0.951
MacA_3
Hemolysin D.
 
  
 0.810
Lwal_0007
Cyclic nucleotide-binding protein.
  
    0.789
TolC_1
Outer membrane protein TolC.
       0.719
CcmA_1
ABC transporter ATP binding protein.
 
  
 0.661
ThiF
Thiazole biosynthesis adenylyltransferase ThiF.
  
    0.633
MacA_1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.502
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.