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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Int-TnPutative lambdoid prophage Rac integrase; Belongs to the 'phage' integrase family. (403 aa)    
Predicted Functional Partners:
Lwal_0016
Phage excisionase.
       0.779
Lwal_0017
Hypothetical protein.
       0.678
fabA
(3R)-hydroxymyristoyl-ACP dehydratase.
  
     0.624
Lwal_0018
Peptidase, S24 family.
  
  
 0.559
Lwal_0720
Transporter family transporter protein.
  
     0.551
traA
Conjugal transfer protein TraA.
  
     0.449
GuaD
Cytidine/deoxycytidylate deaminase.
     
 0.436
Lwal_0019
Hypothetical protein.
       0.435
Lwal_0020
Hypothetical protein.
       0.435
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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