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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_0063Ankyrin repeats (3 copies). (1369 aa)    
Predicted Functional Partners:
EryA
Polyketide synthase module.
 
 0.967
Lwal_1601
Ankyrin repeat protein.
  
 
   0.778
arp_1
Ankyrin repeat protein.
  
     0.774
Lwal_2971
Ankyrin repeats (3 copies).
  
     0.772
arp_2
Ankyrin repeat protein.
  
     0.765
Lwal_2878
Ankyrin repeat protein.
  
     0.763
Lwal_2451
Ankyrin repeat-containing protein.
  
     0.747
Lwal_1939
Ankyrin repeats (3 copies).
  
     0.729
Lwal_3030
Ankyrin repeats (3 copies).
  
     0.706
Lwal_3322
Ankyrin repeat protein.
  
     0.696
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.