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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GfoOxidoreductase. (353 aa)    
Predicted Functional Partners:
AlgD
UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.991
ArnB
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.971
Lwal_0209
Chloramphenicol acetyltransferase.
 
  
 0.928
iolE
Myo-inositol catabolism protein iolE.
 
  
 0.774
iolD
Myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
 
  
 0.763
lysU
Lysine tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.646
yvfE
Cell wall biosynthesis regulatory pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.635
neuC
N-acylglucosamine 2-epimerase.
  
  
 0.630
Afr
Oxidoreductase.
 
  
 0.596
iolCB
IolC/IolB transferase kinase protein.
 
  
 0.592
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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