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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YfdH_3Glycosyl transferase. (321 aa)    
Predicted Functional Partners:
Lwal_0252
Bacterial membrane protein YfhO.
 
    0.920
Lwal_0253
Glycosyltransferase.
 
 
 0.874
Lwal_0256
Methyltransferase.
  
 
 0.866
ArnT
Melitin resistance protein.
 
  
 0.772
pimF
Putative glycosyltransferase.
  
     0.754
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.715
Lwal_0257
Hypothetical protein.
       0.645
EryA
Polyketide synthase module.
  
 
 0.635
Lwal_0245
Undecaprenyl-phosphate mannosyltransferase.
 
     0.438
Lwal_0258
Hypothetical protein.
       0.437
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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