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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (342 aa)    
Predicted Functional Partners:
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.983
Lwal_0256
Methyltransferase.
  
 
 0.891
Lwal_0214
Glycosyltransferase, group 1 family.
  
  
 0.821
Lwal_0253
Glycosyltransferase.
  
  
 0.733
capD
Nucleoside-diphosphate sugar epimerase.
  
  
 0.728
CapD_1
NAD dependent epimerase/dehydratase.
  
  
 0.728
Lwal_0257
Hypothetical protein.
       0.723
YfdH_3
Glycosyl transferase.
  
  
 0.715
Lwal_0252
Bacterial membrane protein YfhO.
  
    0.696
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
 
      0.689
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.