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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_0400Type IV pilus biogenesis protein PilO. (199 aa)    
Predicted Functional Partners:
pilN
Tfp pilus assembly protein PilN.
 
 
 0.997
Lwal_0401
Type IV pilus biogenesis protein PilP.
 
 
 0.996
pilM
Tfp pilus assembly protein, ATPase PilM.
 
 
 0.988
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
 
 0.988
Lwal_1256
LysM domain-containing protein.
  
 
   0.899
Lwal_0509
Fimbrial assembly protein (PilN).
  
 
 0.897
pilZ_1
Type 4 fimbrial biogenesis protein PilZ.
  
   
 0.811
fimV
FimV protein.
  
  
 0.790
PilV
Type IV fimbrial biogenesis protein PilV.
 
   
 0.788
pilE_2
type-IV pilin.
 
  
 0.783
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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