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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
phbC_1Polyhydroxyalkanoic synthase. (594 aa)    
Predicted Functional Partners:
phaB_1
Acetoacetyl CoA reductase.
  
 
 0.943
phaB_2
Acetoacetyl CoA reductase.
  
 
 0.943
pta_1
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.934
FabG_4
Acetyoacetyl CoA reductase.
  
 
 0.933
FabG_2
Acetyoacetyl CoA reductase.
  
 
 0.931
phaB2
Acetyoacetyl CoA reductase.
  
 
 0.928
PhbC_2
Poly-beta-hydroxybutyrate polymerase.
  
  
 
0.916
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.913
phbC_2
PHA synthase.
  
  
 
0.901
ack_1
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
  
 0.876
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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