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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AprESerine metalloprotease; Belongs to the peptidase S8 family. (561 aa)    
Predicted Functional Partners:
Lwal_1566
Calcium-transporting ATPase.
  
 0.766
YlfB
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.670
Lwal_0418
Hypothetical protein.
  
     0.662
Lwal_2635
Hypothetical protein.
  
   
 0.657
ChiD_3
Chitinase.
  
  
 0.656
ChiD_1
Chitinase.
  
  
 0.649
Lwal_2457
SURF1 family protein.
  
 
   0.635
ChiD_2
Chitinase.
  
     0.634
Lwal_1163
Major facilitator family transporter.
  
     0.620
EryA
Polyketide synthase module.
  
 0.619
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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