Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_0632Transmembrane protein. (317 aa)    
Predicted Functional Partners:
Lwal_0631
Transglutaminase.
 
  
 0.981
Lwal_0633
Methanol dehydrogenase regulatory protein.
 
  
 0.940
Lwal_0401
Type IV pilus biogenesis protein PilP.
 
     0.766
pilN
Tfp pilus assembly protein PilN.
  
     0.762
pilZ_1
Type 4 fimbrial biogenesis protein PilZ.
 
     0.749
Lwal_1256
LysM domain-containing protein.
 
     0.749
Lwal_0400
Type IV pilus biogenesis protein PilO.
 
     0.744
pilE_2
type-IV pilin.
  
     0.743
FimT
Type IV pre-pilin.
  
     0.737
pilM
Tfp pilus assembly protein, ATPase PilM.
  
     0.717
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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