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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_0661Deoxyribodipyrimidine photolyase-related protein. (512 aa)    
Predicted Functional Partners:
FabG1
2-deoxy-D-gluconate 3-dehydrogenase.
       0.744
crtN
Dehydrosqualene desaturase.
 
     0.726
PhrB
Deoxyribodipyrimidine photolyase phrB; Belongs to the DNA photolyase family.
 
   
 0.668
Lwal_1539
Hypothetical protein.
 
     0.537
Lwal_0659
3-oxo-5-alpha-steroid 4-dehydrogenase.
 
     0.518
Lwal_0678
Hypothetical protein; Belongs to the UPF0753 family.
  
     0.490
Lwal_1569
Amine oxidase, flavin containing.
 
   
 0.476
Lwal_0658
Hypothetical protein.
       0.454
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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