Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lwal_0673Outer membrane component of multidrug efflux pump. (476 aa)    
Predicted Functional Partners:
Lwal_0674
Putative membrane fusion protein.
 
   0.978
HlyB
Toxin secretion ABC transporter ATP-binding protein.
 
    0.973
GltR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.873
Lwal_0678
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.851
Lwal_0680
Hypothetical protein.
 
     0.845
NuoL_1
NADH-ubiquinone oxidoreductase chain 5.
 
     0.794
Lwal_2901
Membrane protein.
  
     0.723
Lwal_1706
Membrane protein.
  
     0.715
Lwal_1646
Membrane protein.
  
     0.704
Lwal_2903
TraU protein.
  
     0.701
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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