Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cpxRTranscriptional regulatory protein CpxR. (226 aa)    
Predicted Functional Partners:
CpxA
Sensor histidine kinase CpxA.
 
 0.996
gacS/letS
Transmission sensor LetS.
 
 
0.929
YbeZ
Phosphate starvation-inducible protein PhoH.
 
   
 0.847
ybeY
Metal dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
     
 0.845
ArcB
Sensory box sensor histidine kinase/response regulator.
 
 
 0.838
qseC_1
Two component sensor kinase.
 
 
 0.825
CorC
Mg2+ and Co2+ transporter CorC.
 
   
 0.824
Lwal_2492
IcmF.
      
 0.731
ZraS_2
Sensor kinase HydH.
 
 
 0.694
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.588
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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