STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AcdS1-aminocyclopropane-1-carboxylate deaminase. (306 aa)    
Predicted Functional Partners:
YaaA
Hypothetical protein; Belongs to the UPF0246 family.
       0.800
PdhB_2
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
     
  0.800
Lwal_0811
Hypothetical protein.
       0.752
glnA
Glutamine synthetase.
     
 0.731
lspF
Type II secretory pathway protein LspF.
       0.555
iraA
Small-molecule methyltransferase IraA.
  
     0.501
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
       0.489
GspH
General secretion pathway protein LspH.
       0.488
lspK
Type II secretory pathway protein.
       0.486
lspI
Type II secretory pathway protein LspI.
       0.477
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.