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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_0843Hypothetical protein. (420 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
  
 
 0.843
mccB
Propionyl CoA carboxylase subunit beta.
  
  
 0.625
AccD5
Acetyl CoA carboxylase subunit alpha.
  
  
 0.625
Lwal_2663
Saframycin Mx1 synthetase B.
     
 0.534
atpC_1
F-type H -transporting ATPase epsilon chain.
  
    0.528
phs
Pterin 4 alpha carbinolamine dehydratase.
 
  
 0.512
EryA
Polyketide synthase module.
   
 
 0.485
Lwal_0474
ATP synthase protein I.
  
     0.462
Per1
Beta-lactamase.
       0.457
TyrA
2-methylcitrate synthase.
     
 0.437
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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