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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SufS_2Aminotransferase class V. (366 aa)    
Predicted Functional Partners:
nifU
Nitrogen fixation protein NifU.
 
 
 0.965
Lwal_1863
NifU family transporter iron binding protein.
  
 
 0.946
sufC
Component of SufBCD complex, ATP-binding component of ABC superfamily.
 
  
 0.943
SufD
ABC transporter permease.
 
 
 0.908
SufB
Cysteine desulfurase.
 
 
 0.899
Lwal_0846
Phenylacetate-coenzyme A ligase.
 
     0.638
Lwal_2503
Endonuclease/exonuclease/phosphatase family protein.
    
   0.523
Lwal_2639
Endonuclease/Exonuclease/phosphatase family protein.
    
   0.523
Per1
Beta-lactamase.
 
     0.496
Lwal_0372
Serine/threonine protein kinase.
 
     0.476
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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