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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrpRDNA-binding response regulator. (225 aa)    
Predicted Functional Partners:
qseC_1
Two component sensor kinase.
 0.997
gacS/letS
Transmission sensor LetS.
 
 
0.969
ArcB
Sensory box sensor histidine kinase/response regulator.
 
 0.935
CpxA
Sensor histidine kinase CpxA.
 
 
 0.827
YciB
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.721
ZraS_2
Sensor kinase HydH.
 
 
 0.675
qseC_2
Sensory histidine kinase in two-component regulatory system with QseB.
 
   0.618
CyaA_2
Guanylate cyclase.
   
 
 0.594
Cph2_4
Sensory box protein.
 
 
 0.551
Gmr_3
Regulatory protein (GGDEF domain).
  
 
 0.542
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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