Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
qseC_1Two component sensor kinase. (474 aa)    
Predicted Functional Partners:
lrpR
DNA-binding response regulator.
 
 0.998
gacS/letS
Transmission sensor LetS.
 
 
0.891
YciB
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.841
cpxR
Transcriptional regulatory protein CpxR.
 
 
 0.825
PdhB_2
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
    
 0.817
Cph2_4
Sensory box protein.
  
 
 0.692
OmpR
DNA-binding response regulator.
 
   0.584
UvrY
Response regulator GacA.
 
 
 0.581
Puo
Amine oxidase.
   
    0.572
EryA
Polyketide synthase module.
  
 
 0.554
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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