Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_0953Transposase. (292 aa)    
Predicted Functional Partners:
Lwal_0954
Transposase, IS911.
 
  
 0.956
Lwal_0941
Transposase IS3/IS911 family protein.
 
  
 0.712
Lwal_0955
Prophage regulatory protein-like protein.
  
    0.477
Lwal_2852
Transposase, IS116/IS110/IS902.
 
  
 0.448
Lwal_0568
Transposase.
 
  
 0.435
Lwal_1100
Transposase; Required for the transposition of the insertion element.
 
   
 0.425
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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