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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lvrA_1Legionella vir region protein. (293 aa)    
Predicted Functional Partners:
Lwal_1154
Phage repressor.
 
     0.886
Lwal_1900
Hypothetical protein.
  
     0.765
Lwal_2492
IcmF.
  
     0.760
Lwal_2840
Opacity protein-like surface antigen.
  
     0.755
Lwal_0282
Protein-tyrosine phosphatase.
  
     0.751
Lwal_2485
Protein IcmE (DotG).
 
    0.751
YdgA
Putative membrane protein YdgA-like protein.
  
     0.742
dotA
Defect in organelle trafficking protein DotA.
  
     0.740
Lwal_2144
Putative helicase/relaxase.
  
     0.724
Lwal_3318
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.717
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.