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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motA2Flagellar motor protein MotA. (307 aa)    
Predicted Functional Partners:
motB_1
Flagellar motor protein MotB.
 
 0.999
motB_2
Flagellar motor protein MotD.
  
 0.992
Gmr_3
Regulatory protein (GGDEF domain).
  
  
 0.987
Cph2_6
Inner membrane protein.
  
  
 0.987
Gmr_4
GGDEF domain-containing sensory box protein.
  
  
 0.987
fliF
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.950
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.940
flgC
Flagellar basal body rod protein FlgC.
 
  
 0.934
gacS/letS
Transmission sensor LetS.
  
  
 0.928
flgG
Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
 
  
 0.925
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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