Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_1247UVB-resistance protein UVR8. (262 aa)    
Predicted Functional Partners:
EryA
Polyketide synthase module.
   
 
 0.783
Lwal_2864
Hypothetical protein.
  
     0.738
legL7_2
Leucine-rich repeat-containing protein.
  
     0.725
Lwal_2970
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
     0.719
legL6_1
Leucine-rich repeat-containing protein.
  
     0.718
Lwal_2865
Hypothetical protein.
  
     0.699
legL1_2
Gala protein type 1, 3 or 4.
  
     0.695
Lwal_3187
Substrate of the Dot/Icm secretion system.
  
     0.653
Ptp
Serine carboxypeptidase.
  
     0.628
Lwal_2855
Ankyrin repeats (3 copies).
  
 
  0.606
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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