Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
parB_4Chromosome partitioning protein ParB; Belongs to the ParB family. (263 aa)    
Predicted Functional Partners:
parA
Sporulation initiation inhibitor protein Soj.
 
 
 0.898
Soj_1
Putative chromosome partitioning protein ParA.
 
 
 0.858
soj
Sporulation initiation inhibitor protein Soj.
 
 
 0.820
dacB
D-alanyl-D-alanine carboxypeptidase.
       0.808
Lwal_1249
Acid sphingomyelinase-like phosphodiesterase.
     
 0.751
ftsK
Cell division protein FtsK.
  
   
 0.745
Lwal_1252
Dot/Icm secretion system substrate.
       0.744
parB_1
Chromosome partitioning protein ParB; Belongs to the ParB family.
  
     0.656
gidB
Glucose inhibited division protein B GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.592
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
     
 0.563
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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