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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_1300Hypothetical protein. (104 aa)    
Predicted Functional Partners:
pepA
Leucine aminopeptidase; Belongs to the peptidase M17 family.
       0.777
murJ
Integral membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.777
Lwal_1686
Phage repressor.
  
     0.626
Lwal_1449
Hypothetical protein.
  
     0.554
Lwal_1940
Hypothetical protein.
  
     0.516
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.495
Lwal_1900
Hypothetical protein.
  
     0.453
Lwal_2082
Hypothetical protein.
  
     0.443
Lwal_2090
6-pyruvoyl tetrahydropterin synthase.
  
     0.406
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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