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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comMCompetence related protein ComM. (503 aa)    
Predicted Functional Partners:
dprA
DNA processing enzyme DprA.
 
 0.848
comF
Competence protein ComF.
 
  
 0.840
Lwal_2201
Hypothetical protein; Belongs to the UPF0102 family.
 
  
 0.772
comA
DNA uptake/competence protein ComA.
 
  
 0.625
YqiC
Membrane fusogenic activity.
       0.555
ruvC
Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.477
QmcA
Protease.
  
    0.477
ybbJ
Inner membrane protein YbbJ.
       0.473
Lwal_1449
Hypothetical protein.
       0.473
gacS/letS
Transmission sensor LetS.
  
    0.453
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.