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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YbhS_2ABC transporter permease. (391 aa)    
Predicted Functional Partners:
YbhF_3
ABC transporter ATP-binding protein.
  
 0.990
YbhF_1
ABC transporter ATP-binding protein.
  
 0.959
MacA_3
Hemolysin D.
 
  
 0.955
YbhF_2
ABC transporter ElsE.
  
 0.952
Lwal_0008
Hemolysin D.
 
  
 0.807
CcmA_1
ABC transporter ATP binding protein.
 
  
 0.782
DgdA_1
Aminotransferase class-III.
  
    0.680
YhbG
ABC transporter ATP binding protein.
   
  0.641
ThiF
Thiazole biosynthesis adenylyltransferase ThiF.
  
  
 0.628
YrdA
Transferase.
       0.589
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.