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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_1685Hypothetical protein. (445 aa)    
Predicted Functional Partners:
Lwal_1686
Phage repressor.
       0.781
Lwal_1681
Zinc metalloprotease.
       0.707
Lwal_1683
EcoKI restriction-modification system protein HsdS.
       0.707
HsdR_2
Type-1 restriction system, restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.705
HsdM_2
Putative type I restriction enzyme M protein.
       0.705
Lwal_1687
Protein LvrA.
       0.515
Lwal_1688
Hypothetical protein.
       0.515
csrA-2
Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).
       0.515
Lwal_1690
Hypothetical protein.
       0.515
Lwal_1691
Hypothetical protein.
       0.515
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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