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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_1710Protein kinase domain protein. (355 aa)    
Predicted Functional Partners:
Lwal_1714
Putative aminoglycoside phosphotransferase.
 
     0.943
Lwal_1711
GNAT family acetyltransferase.
 
     0.923
Lwal_1713
Hypothetical protein.
       0.784
KynB_1
Metal-dependent hydrolase.
       0.779
Lwal_1602
Serine/threonine protein kinase.
  
     0.770
spkD
Serine/threonine-protein kinase D.
  
 
 
 0.768
Lwal_2859
LuxR family transcriptional regulator.
 
     0.754
Lwal_1722
GNAT family acetyltransferase.
  
    0.752
ChiD_3
Chitinase.
  
     0.750
ChiD_1
Chitinase.
  
     0.747
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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