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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrxBThioredoxin reductase. (316 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase.
  
 
 0.966
TrxA_2
Putative thioredoxin 1; Belongs to the thioredoxin family.
 
 
 0.959
trxA3
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.932
csdB
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.907
Lwal_1176
Alkylhydroperoxide reductase, AhpC/TSA family.
  
 
 0.884
Hcr
Oxidoreductase, FAD-binding protein.
   
 
 0.857
aat
leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.800
Lwal_2568
Abi-like protein.
   
 
 0.793
MoeZ
Rhodanese domain-containing protein.
  
  
 0.781
DipZ
Cytochrome C biogenesis protein.
  
 
 0.753
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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