STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_1900Hypothetical protein. (269 aa)    
Predicted Functional Partners:
YfdZ
Aminotransferase.
       0.800
recJ
single-stranded-DNA-specific exonuclease RecJ.
       0.800
lvrA_2
Legionella vir region protein.
  
     0.767
lvrA_1
Legionella vir region protein.
  
     0.765
lvrA3
Vir region protein.
  
     0.763
Lwal_1686
Phage repressor.
  
     0.761
Lwal_2840
Opacity protein-like surface antigen.
  
     0.740
Lwal_0282
Protein-tyrosine phosphatase.
  
     0.739
Lwal_1898
Hypothetical protein.
 
     0.738
Lwal_1154
Phage repressor.
  
     0.733
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.