MltE protein (Legionella waltersii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MltE

Membrane bound lytic murein transglycosylase D. (432 aa)

Predicted Functional Partners:

Lwal_2485

0.920

flgG

0.878

fliD

0.737

fliE

0.671

FliI

0.645

FliM

0.586

rlpA_1

0.585

amiB

0.556

ftsI

0.549

mrdA

0.549

Your Current Organism:

Legionella waltersii

NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FliI	FliM	Lwal_1851	Lwal_1811	Nucleotide binding protein FliI.	Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.	0.990
FliI	MltE	Lwal_1851	Lwal_1962	Nucleotide binding protein FliI.	Membrane bound lytic murein transglycosylase D.	0.645
FliI	flgG	Lwal_1851	Lwal_0449	Nucleotide binding protein FliI.	Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.	0.985
FliI	fliD	Lwal_1851	Lwal_0835	Nucleotide binding protein FliI.	Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.980
FliI	fliE	Lwal_1851	Lwal_1847	Nucleotide binding protein FliI.	Flagellar hook-basal body complex protein.	0.982
FliM	FliI	Lwal_1811	Lwal_1851	Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.	Nucleotide binding protein FliI.	0.990
FliM	MltE	Lwal_1811	Lwal_1962	Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.	Membrane bound lytic murein transglycosylase D.	0.586
FliM	flgG	Lwal_1811	Lwal_0449	Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.	Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.	0.989
FliM	fliD	Lwal_1811	Lwal_0835	Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.	Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.982
FliM	fliE	Lwal_1811	Lwal_1847	Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.	Flagellar hook-basal body complex protein.	0.984
Lwal_2485	MltE	Lwal_2485	Lwal_1962	Protein IcmE (DotG).	Membrane bound lytic murein transglycosylase D.	0.920
Lwal_2485	amiB	Lwal_2485	Lwal_1367	Protein IcmE (DotG).	N-acetylmuramoyl-L-alanine amidase.	0.879
MltE	FliI	Lwal_1962	Lwal_1851	Membrane bound lytic murein transglycosylase D.	Nucleotide binding protein FliI.	0.645
MltE	FliM	Lwal_1962	Lwal_1811	Membrane bound lytic murein transglycosylase D.	Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.	0.586
MltE	Lwal_2485	Lwal_1962	Lwal_2485	Membrane bound lytic murein transglycosylase D.	Protein IcmE (DotG).	0.920
MltE	amiB	Lwal_1962	Lwal_1367	Membrane bound lytic murein transglycosylase D.	N-acetylmuramoyl-L-alanine amidase.	0.556
MltE	flgG	Lwal_1962	Lwal_0449	Membrane bound lytic murein transglycosylase D.	Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.	0.878
MltE	fliD	Lwal_1962	Lwal_0835	Membrane bound lytic murein transglycosylase D.	Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.737
MltE	fliE	Lwal_1962	Lwal_1847	Membrane bound lytic murein transglycosylase D.	Flagellar hook-basal body complex protein.	0.671
MltE	ftsI	Lwal_1962	Lwal_0383	Membrane bound lytic murein transglycosylase D.	Peptidoglycan synthetase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.	0.549