STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2011Hypothetical protein. (313 aa)    
Predicted Functional Partners:
pimA
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
 
 
 
 0.963
Lwal_2012
Hypothetical protein.
 
  
 0.962
Lwal_2008
Hypothetical protein.
 
   
 0.961
Lwal_2009
Hypothetical protein.
 
   
 0.961
Lwal_2013
Hypothetical protein.
 
   
 0.956
Lwal_2014
Outer membrane protein PgaA.
 
   
 0.943
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.886
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.877
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.862
Lwal_2007
Hypothetical protein.
     
 0.826
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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