STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2014Outer membrane protein PgaA. (972 aa)    
Predicted Functional Partners:
Lwal_2013
Hypothetical protein.
 
   
 0.950
Lwal_2008
Hypothetical protein.
 
  
 0.948
Lwal_2011
Hypothetical protein.
 
   
 0.943
Lwal_2009
Hypothetical protein.
 
   
 0.942
Lwal_2012
Hypothetical protein.
 
   
 0.942
pimA
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
 
  
 0.936
Lwal_2007
Hypothetical protein.
       0.707
Lwal_1405
Two component response regulator.
  
   
 0.536
Lwal_0256
Methyltransferase.
  
  
 0.528
GalE_2
NAD dependent epimerase/dehydratase family protein.
  
    0.519
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.