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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HopD2Tyrosine phosphatase II superfamily transporter protein. (328 aa)    
Predicted Functional Partners:
spkD
Serine/threonine-protein kinase D.
  
 0.900
yjeA
Endo-1,4-beta-xylanase-like protein.
  
 0.869
Lwal_1566
Calcium-transporting ATPase.
  
 
 
 0.783
Lwal_1745
Putative lipase.
 
  
 0.782
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.779
Lwal_2697
Acetylpolyamine aminohydrolase.
  
 
 0.753
Lwal_1671
Hypothetical protein.
  
     0.750
Lwal_1163
Major facilitator family transporter.
  
     0.748
Lwal_2635
Hypothetical protein.
  
     0.748
YlfB
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.732
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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