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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2074Hypothetical protein. (320 aa)    
Predicted Functional Partners:
Lwal_2485
Protein IcmE (DotG).
    
   0.905
Rna
Ribonuclease, T2 family; Belongs to the RNase T2 family.
       0.588
dotC
Defect in organelle trafficking lipoprotein DotC.
   
   0.577
Lwal_0288
Neurogenic locus notch like protein precursor.
    
   0.576
dotD
Lipoprotein DotD.
    
   0.576
lphA
LphA (DotK).
    
   0.576
Lwal_2484
IcmK protein.
    
   0.576
Lwal_2486
Protein IcmG (DotF).
    
   0.576
YiaD
Outer membrane protein, OmpA family protein.
    
   0.576
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
   0.434
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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