Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2080Hypothetical protein. (310 aa)    
Predicted Functional Partners:
Lwal_2079
TPR repeat containing protein.
     0.996
Lwal_2081
Hypothetical protein.
   
 0.990
Lwal_2078
KQDN repeat-containing protein.
 
 
 0.978
Lwal_2083
Hypothetical protein.
 
    0.977
Lwal_2082
Hypothetical protein.
 
     0.968
moxR
Methanol dehydrogenase regulatory protein.
 
     0.952
NylA
Amidase; Belongs to the amidase family.
   
   0.779
Lwal_2085
Hypothetical protein.
       0.761
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.645
Lwal_1601
Ankyrin repeat protein.
  
  0.621
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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