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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2081Hypothetical protein. (342 aa)    
Predicted Functional Partners:
Lwal_2080
Hypothetical protein.
   
 0.985
Lwal_2083
Hypothetical protein.
 
  
 0.958
Lwal_2078
KQDN repeat-containing protein.
 
   
 0.955
Lwal_2079
TPR repeat containing protein.
 
   
 0.953
Lwal_2082
Hypothetical protein.
 
     0.950
moxR
Methanol dehydrogenase regulatory protein.
 
  
 0.948
NylA
Amidase; Belongs to the amidase family.
  
    0.631
Lwal_2085
Hypothetical protein.
       0.612
Lwal_0256
Methyltransferase.
  
  
 0.525
tpm
Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.
 
 
 
 0.480
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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