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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AcrA_2Membrane-fusion protein AcrA. (381 aa)    
Predicted Functional Partners:
MacB_3
ABC transporter permease.
 
 
 0.953
TolC_3
Outer membrane efflux protein.
 
   0.951
MacB_4
ABC transporter ATP-binding protein.
 
 
 0.902
Lwal_2144
Putative helicase/relaxase.
 
  
 0.871
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
       0.786
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
     
 0.690
MacB_1
ABC transporter permease.
 
 
 0.680
Lwal_2103
Hypothetical protein.
  
     0.640
cecB
Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.627
iraA
Small-molecule methyltransferase IraA.
  
     0.568
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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