Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RpfGMetal dependent phosphohydrolase. (542 aa)    
Predicted Functional Partners:
Gmr_3
Regulatory protein (GGDEF domain).
 
 
 0.922
Cph2_6
Inner membrane protein.
 
 
 0.922
Gmr_4
GGDEF domain-containing sensory box protein.
 
 
 0.922
gacS/letS
Transmission sensor LetS.
  
 
 0.894
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
    0.822
CyaA_4
Adenylate/guanylate cyclase transmembrane protein.
 
 
   0.796
fliF
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.785
Cph2_4
Sensory box protein.
 
 
 
 0.697
CyaA_2
Guanylate cyclase.
 
 
   0.689
cyaA
Fused adenylate cyclase/two component hybrid sensor/regulator.
 
 
 
 0.676
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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