NiaR protein (Legionella waltersii) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

NiaR

Transcriptional regulator. (230 aa)

Predicted Functional Partners:

Lwal_2283

0.962

rpoB

0.578

rpoZ

0.576

rpoC

0.576

rpoA

0.576

Lwal_2284

0.493

rpoS

0.400

rpoD

0.400

rpoH

0.400

Your Current Organism:

Legionella waltersii

NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lwal_2283	Lwal_2284	Lwal_2283	Lwal_2284	Bleomycin resistance protein.	Transcription activator.	0.632
Lwal_2283	NiaR	Lwal_2283	Lwal_2282	Bleomycin resistance protein.	Transcriptional regulator.	0.962
Lwal_2284	Lwal_2283	Lwal_2284	Lwal_2283	Transcription activator.	Bleomycin resistance protein.	0.632
Lwal_2284	NiaR	Lwal_2284	Lwal_2282	Transcription activator.	Transcriptional regulator.	0.493
Lwal_2284	rpoA	Lwal_2284	Lwal_2404	Transcription activator.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.756
Lwal_2284	rpoB	Lwal_2284	Lwal_0971	Transcription activator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.434
Lwal_2284	rpoC	Lwal_2284	Lwal_0972	Transcription activator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.434
Lwal_2284	rpoZ	Lwal_2284	Lwal_0158	Transcription activator.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.434
NiaR	Lwal_2283	Lwal_2282	Lwal_2283	Transcriptional regulator.	Bleomycin resistance protein.	0.962
NiaR	Lwal_2284	Lwal_2282	Lwal_2284	Transcriptional regulator.	Transcription activator.	0.493
NiaR	rpoA	Lwal_2282	Lwal_2404	Transcriptional regulator.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.576
NiaR	rpoB	Lwal_2282	Lwal_0971	Transcriptional regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.578
NiaR	rpoC	Lwal_2282	Lwal_0972	Transcriptional regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.576
NiaR	rpoD	Lwal_2282	Lwal_1167	Transcriptional regulator.	RNA polymerase sigma 70 factor (RpoD); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.400
NiaR	rpoH	Lwal_2282	Lwal_1342	Transcriptional regulator.	RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.400
NiaR	rpoS	Lwal_2282	Lwal_0871	Transcriptional regulator.	Stationary phase specific sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.	0.400
NiaR	rpoZ	Lwal_2282	Lwal_0158	Transcriptional regulator.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.576
rpoA	Lwal_2284	Lwal_2404	Lwal_2284	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription activator.	0.756
rpoA	NiaR	Lwal_2404	Lwal_2282	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional regulator.	0.576
rpoA	rpoB	Lwal_2404	Lwal_0971	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999