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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BepF_1HlyD family transporter secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (371 aa)    
Predicted Functional Partners:
mexF2
Putative multidrug-efflux system transmembrane protein.
 
 0.954
lmxF
RND multidrug efflux transporter MexF.
 
 0.887
OprM_2
Multidrug efflux MFS outer membrane protein.
 
 
 0.831
OprM_3
Outer membrane efflux protein.
 
 
 0.826
acrB
Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.808
TtgC
Outer membrane efflux protein.
  
   0.788
OprM_1
Outer membrane efflux protein.
  
   0.732
helA_2
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.584
MacB_1
ABC transporter permease.
 
 
 0.576
MacB_3
ABC transporter permease.
  
 
 0.508
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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