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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2338Hypothetical protein; N-terminal GNAT family transporter acetyltransferase. (286 aa)    
Predicted Functional Partners:
Lwal_2340
Hypothetical protein.
 
     0.666
PurP
Xanthine/uracil permease.
       0.597
lvrA3
Vir region protein.
  
     0.519
lvrA_2
Legionella vir region protein.
  
     0.506
dotA
Defect in organelle trafficking protein DotA.
  
     0.489
fabF_2
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.486
Lwal_3318
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.470
Lwal_1264
Hypothetical protein.
  
     0.456
Lwal_2341
Hypothetical protein.
       0.446
Lwal_2840
Opacity protein-like surface antigen.
  
     0.440
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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