STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ApxIB_1ABC transporter. (966 aa)    
Predicted Functional Partners:
cvaA
Colicin V secretion protein CvaA.
 
 
 0.976
SunT
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
    
0.856
Lwal_2428
Outer membrane efflux protein.
 
    0.841
braC
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.
       0.773
lssD_1
Secretion system protein D.
 
 
 0.637
Lwal_2423
Hypothetical protein.
       0.579
lssD_2
Secretion system protein D.
  
 
 0.577
msbA
ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
  
0.540
Lwal_0879
ABC transporter ATP-binding protein.
 
 
  
0.530
rtxA-1
Structural toxin protein RtxA.
 
  
 0.526
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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