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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2441Zinc metalloprotease. (233 aa)    
Predicted Functional Partners:
Lwal_2442
Hypothetical protein.
       0.800
HsdR_2
Type-1 restriction system, restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.781
HsdM_2
Putative type I restriction enzyme M protein.
 
     0.776
Lwal_1683
EcoKI restriction-modification system protein HsdS.
 
    0.773
Lwal_2443
Hypothetical protein.
       0.609
Lwal_2440
SM-20-like protein.
       0.530
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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