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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2458Hypothetical protein. (182 aa)    
Predicted Functional Partners:
Lwal_2459
Cytochrome c oxidase assembly protein.
 
     0.892
Lwal_2457
SURF1 family protein.
 
     0.889
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
     0.836
YpmQ
SCO1/SenC family transporter protein.
 
     0.831
Lwal_2456
Hypothetical protein.
 
     0.714
dotA
Defect in organelle trafficking protein DotA.
  
     0.688
enhA_5
Enhanced entry protein EnhA.
  
     0.663
Lwal_2485
Protein IcmE (DotG).
  
     0.654
enhA_1
Enhanced entry protein EnhA.
  
     0.651
Lwal_3318
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.637
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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