STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbC_2Conjugal transfer protein TrbC. (125 aa)    
Predicted Functional Partners:
trbE_2
Conjugal transfer protein TrbE.
   
 
 0.814
trbD_2
Conjugal transfer protein trbD.
     
 0.800
trbF_2
Conjugal transfer protein trbF.
     
 0.795
trbG_2
Conjugal transfer protein TrbG.
     
 0.794
trbI_2
Conjugal transfer protein TrbI.
     
 0.794
Lwal_2580
Conjugal transfer protein TrbH.
       0.787
virB
LvhB11.
     
 0.776
trbJ_2
Conjugal transfer protein TrbJ.
     
 0.742
traC
DNA primase traC.
       0.716
traF
Conjugal transfer protein TraF.
     
 0.710
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.