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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CbdACholine monooxygenase. (361 aa)    
Predicted Functional Partners:
gbsA_2
Glycine betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
   
 
 0.920
betA
Oxygen-dependent choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
    
 0.906
gbsA_1
Glycine betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.901
Hcr
Oxidoreductase, FAD-binding protein.
 
  
 0.857
Lwal_2704
Hypothetical protein.
       0.666
EryA
Polyketide synthase module.
  
 
 0.591
Lwal_2663
Saframycin Mx1 synthetase B.
  
  
 0.503
pksJ
Polyketide synthase, type I.
 
  
 0.474
Lwal_1576
Cytochrome P450(MEG).
 
  
 0.466
Lwal_1566
Calcium-transporting ATPase.
  
     0.457
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
Server load: medium (74%) [HD]
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