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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YlfBEndoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (477 aa)    
Predicted Functional Partners:
Lwal_2635
Hypothetical protein.
 
   
 0.896
ChiD_1
Chitinase.
 
   
 0.895
ChiD_3
Chitinase.
 
   
 0.895
rtxA_1
Structural toxin protein RtxA.
   
 
 0.893
rtxA_2
Structural toxin protein RtxA.
   
 
 0.893
lvrE_1
Legionella vir region protein.
    
 
 0.887
lvrE_2
Legionella vir region protein.
    
 
 0.887
Lwal_1508
Hypothetical protein.
    
 
 0.887
lvrE_3
Legionella vir region protein.
    
 
 0.887
lvrE_4
Legionella vir region protein.
    
 
 0.887
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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