Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2747Cellobiose phosphorylase. (280 aa)    
Predicted Functional Partners:
EamA
Integral membrane protein.
       0.787
Lwal_2748
GtrA-like protein.
 
     0.711
YfdH_1
Glycosyltransferase, group 2 family protein (glycan biosynthesis).
 
  
 0.518
YlfB
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.507
ArnT
Melitin resistance protein.
 
  
 0.503
Lwal_2785
Glycosyl transferase.
 
    0.501
pimF
Putative glycosyltransferase.
 
  
 0.427
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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