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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PilVType IV fimbrial biogenesis protein PilV. (179 aa)    
Predicted Functional Partners:
PilW
Type IV fimbrial biogenesis PilW-like protein.
 
  
 0.991
Lwal_2755
Type IV fimbrial biogenesis PilY1-like protein.
 
  
 0.990
PilX
Tfp pilus assembly protein PilX.
 
  
 0.990
FimT
Type IV pre-pilin.
 
  
 0.971
pilE_2
type-IV pilin.
 
   
 0.928
Lwal_0401
Type IV pilus biogenesis protein PilP.
  
  
 0.805
Lwal_0143
Hypothetical protein.
  
  
 0.800
pilN
Tfp pilus assembly protein PilN.
 
   
 0.792
Lwal_0400
Type IV pilus biogenesis protein PilO.
 
   
 0.788
comA
DNA uptake/competence protein ComA.
 
   
 0.761
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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